logo CaMPDB: Calpain for Modulatory Proteolysis Database

CL0963 : calpain 1

[ CaMP Format ]

* Basic Information

OrganismGallus gallus (chicken)
Protein Nameslarge subunit; calpain 1, large subunit [Gallus gallus]; Calpain-1 catalytic subunit;; Calpain-1 large subunit; Calcium-activated neutral proteinase; CANP; Mu/M-type
Gene NamesCAPN1; calpain 1, (mu/I) large subunit
Gene Locus3; chromosome 3
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
NP_990634 NM_205303 396240 P00789 N/A N/A N/A gga:396240

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 705 aa

Average Mass: 80.352 kDa

Monoisotopic Mass: 80.300 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Peptidase_C2 1. 48347820.11.4e-243
Calpain_III 1. 358513394.71.6e-115
efhand 1. 58060812.30.96
efhand 2. 61063819.90.01

3. Sequence Information

Fasta Sequence: CL0963.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* References

[PubMed ID: 18727211] Zhang ZR, Liu YP, Jiang X, Du HR, Zhu Q, Study on association of single nucleotide polymorphism of CAPN1 gene with muscle fibre and carcass traits in quality chicken populations. J Anim Breed Genet. 2008 Aug;125(4):258-64.

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