logo CaMPDB: Calpain for Modulatory Proteolysis Database

XSB1607 : PREDICTED: similar to ryanodine receptor 1 (skeletal) [Rattus norvegicus]

[ CaMP Format ]

This entry is computationally expanded from SB0015

* Basic Information

OrganismRattus norvegicus (Norway rat)
Protein Namessimilar to ryanodine receptor 1 (skeletal)
Gene NamesLOC686059; Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
XP_574411 XM_574411 686059 N/A N/A N/A N/A N/A

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 3972 aa

Average Mass: 445.495 kDa

Monoisotopic Mass: 445.211 kDa

2. Domain Information

Annotated Domains: Not Available.

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Ins145_P3_rec 1. 10212356.35.5e-104
MIR 1. 213392266.27.5e-77
RYDR_ITPR 1. 441645331.71.4e-96
SPRY 1. 660798138.91.6e-38
RyR 1. 851945221.03e-63
RyR 2. 9651059212.31.3e-60
SPRY 2. 1086119668.32.9e-17
--- cleavage 1388 ---
SPRY 3. 14181558153.46.7e-43
RIIa 1. 18231860-5.52.6
PRA-PH 1. 19392012-50.87.2
RYDR_ITPR 2. 20432251306.75e-89
RyR 3. 26212715216.85.6e-62
--- cleavage 2730 ---
RyR 4. 27412829180.16.2e-51
Hpt 1. 29773051-9.06
Transposase_12 1. 32133273-55.73.1
Phospho_p8 1. 32853333-14.63.4
DUF1654 1. 34043466-24.09.5
RIH_assoc 1. 37433876326.36.3e-95

3. Sequence Information

Fasta Sequence: XSB1607.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

2 [sites]

Cleavage sites (±10aa)


Ser2730 Gln

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'

Sequence conservation (by blast)


Thr1388 Gln

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'

Sequence conservation (by blast)

* References