logo CaMPDB: Calpain for Modulatory Proteolysis Database

XSB2559 : beta-actin [Anas platyrhynchos]

[ CaMP Format ]

This entry is computationally expanded from SB0031

* Basic Information

OrganismAnas platyrhynchos
Protein Namesbeta-actin
Gene NamesACTB
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
ABR87937 N/A N/A A6ZIB9_ANAPL N/A N/A N/A N/A

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 375 aa

Average Mass: 41.738 kDa

Monoisotopic Mass: 41.711 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Actin 1. 2375823.61.2e-244
--- cleavage 37 (inside Actin 2..375) ---

3. Sequence Information

Fasta Sequence: XSB2559.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)

[Site 1] RAVFPSIVGR37-PRHQGVMVGM

Arg37 Pro

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Arg28Ala29Val30Phe31Pro32Ser33Ile34Val35Gly36Arg37
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Pro38Arg39His40Gln41Gly42Val43Met44Val45Gly46Met47

Sequence conservation (by blast)

* References

[PubMed ID: 18346857] Song Y, Wang C, Wang C, Lv L, Chen Y, Zuo Z, Exogenous leptin promotes the recovery of regressed ovary in fasted ducks. Anim Reprod Sci. 2009 Feb;110(3-4):306-18. Epub 2008 Feb 13.