logo CaMPDB: Calpain for Modulatory Proteolysis Database

XSB2771 : actin-7 [Zea mays]

[ CaMP Format ]

This entry is computationally expanded from SB0071

* Basic Information

OrganismZea mays
Protein NamesActin-7; Putative uncharacterized protein
Gene NamesLOC100283878; actin-7
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
NP_001150248 NM_001156776 100283878 B4FRH8_MAIZE N/A N/A N/A N/A

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 377 aa

Average Mass: 41.680 kDa

Monoisotopic Mass: 41.653 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Actin 1. 4377824.18.7e-245
--- cleavage 39 (inside Actin 4..377) ---

3. Sequence Information

Fasta Sequence: XSB2771.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)

[Site 1] RAVFPSIVGR39-PRHTGVMVGM

Arg39 Pro

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Arg30Ala31Val32Phe33Pro34Ser35Ile36Val37Gly38Arg39
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Pro40Arg41His42Thr43Gly44Val45Met46Val47Gly48Met49

Sequence conservation (by blast)

* References

[PubMed ID: 18937034] Alexandrov NN, Brover VV, Freidin S, Troukhan ME, Tatarinova TV, Zhang H, Swaller TJ, Lu YP, Bouck J, Flavell RB, Feldmann KA, Insights into corn genes derived from large-scale cDNA sequencing. Plant Mol Biol. 2009 Jan;69(1-2):179-94. Epub 2008 Oct 21.