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XSB2775 : actin [Ipomoea batatas]

[ CaMP Format ]

This entry is computationally expanded from SB0071

* Basic Information

OrganismIpomoea batatas (sweet potato)
Protein Namesactin
Gene NamesNot available
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
ABY19575 N/A N/A A9YMF0_IPOBA N/A N/A N/A N/A

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 241 aa

Average Mass: 26.772 kDa

Monoisotopic Mass: 26.755 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Actin 1. 4241267.04.4e-77
--- cleavage 39 (inside Actin 4..241) ---

3. Sequence Information

Fasta Sequence: XSB2775.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)

[Site 1] RAVFPSIVGR39-PRHTGVMVGM

Arg39 Pro

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Arg30Ala31Val32Phe33Pro34Ser35Ile36Val37Gly38Arg39
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Pro40Arg41His42Thr43Gly44Val45Met46Val47Gly48Met49

Sequence conservation (by blast)

* References

None.