logo CaMPDB: Calpain for Modulatory Proteolysis Database

XSB2791 : Os05g0106600 [Oryza sativa (japonica cultivar-group)]

[ CaMP Format ]

This entry is computationally expanded from SB0071

* Basic Information

OrganismOryza sativa Japonica Group
Protein NamesOs05g0106600 protein; cDNA clone:001-036-C04, full insert sequence; Putative actin; hypothetical protein
Gene NamesOs05g0106600
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
NP_001054419 NM_001060954 4337566 Q65XH8_ORYSJ N/A N/A N/A osa:4337566

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 377 aa

Average Mass: 41.696 kDa

Monoisotopic Mass: 41.669 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Actin 1. 4377824.85.2e-245
--- cleavage 39 (inside Actin 4..377) ---

3. Sequence Information

Fasta Sequence: XSB2791.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)


Arg39 Pro

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'

Sequence conservation (by blast)

* References

[PubMed ID: 16381971] Ohyanagi H, Tanaka T, Sakai H, Shigemoto Y, Yamaguchi K, Habara T, Fujii Y, Antonio BA, Nagamura Y, Imanishi T, Ikeo K, Itoh T, Gojobori T, Sasaki T, The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa ssp. japonica genome information. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D741-4.

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