logo CaMPDB: Calpain for Modulatory Proteolysis Database

XSB2934 : rCG55135, isoform CRA_a [Rattus norvegicus]

[ CaMP Format ]

This entry is computationally expanded from SB0081

* Basic Information

OrganismRattus norvegicus (Norway rat)
Protein NamesrCG55135; isoform CRA_a
Gene NamesNot available
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
EDL98751 N/A N/A N/A N/A N/A N/A N/A

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 2577 aa

Average Mass: 273.684 kDa

Monoisotopic Mass: 273.513 kDa

2. Domain Information

Annotated Domains: Not Available.

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
FERM_N 1. 126235101.23.5e-27
FERM_M 1. 237349144.72.8e-40
--- cleavage 469 ---
Talin_middle 1. 527688365.97.4e-107
Stork_head 1. 764831-14.03.2
Inhibitor_I34 1. 876941-11.37.9
CRA_rpt 1. 943981-6.08.2
CMD 1. 10131095-15.18.7
DUF1707 1. 11911240-24.33.6
XhlA 1. 13961447-17.36.8
Ins_element1 1. 15121583-42.32.4
WSK 1. 167117000.98
HHH 1. 184118700.16.9
VBS 1. 18852009288.81.2e-83
Vir_act_alpha_C 1. 22202298-18.91.2
Wos2 1. 23132358-3.63.1
I_LWEQ 1. 23772569372.57.7e-109

3. Sequence Information

Fasta Sequence: XSB2934.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)


Gln469 Gln

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'

Sequence conservation (by blast)

* References

[PubMed ID: 15632090] Florea L, Di Francesco V, Miller J, Turner R, Yao A, Harris M, Walenz B, Mobarry C, Merkulov GV, Charlab R, Dew I, Deng Z, Istrail S, Li P, Sutton G, Gene and alternative splicing annotation with AIR. Genome Res. 2005 Jan;15(1):54-66.