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XSB2951 : coatomer protein complex, subunit beta 1, isoform CRA_b [Rattus norvegicus]

[ CaMP Format ]

This entry is computationally expanded from SB0044

* Basic Information

OrganismRattus norvegicus (Norway rat)
Protein Namescoatomer protein complex; subunit beta 1; isoform CRA_b
Gene NamesCopb1
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
EDM17783 N/A 114023 N/A N/A N/A N/A N/A

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 947 aa

Average Mass: 106.201 kDa

Monoisotopic Mass: 106.133 kDa

2. Domain Information

Annotated Domains: Not Available.

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Adaptin_N 1. 18544502.75e-148
--- cleavage 522 (inside Adaptin_N 18..544) ---
Coatamer_beta_C 1. 659941563.13.2e-166

3. Sequence Information

Fasta Sequence: XSB2951.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)


Ser522 Ser

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'

Sequence conservation (by blast)

* References

[PubMed ID: 15632090] Florea L, Di Francesco V, Miller J, Turner R, Yao A, Harris M, Walenz B, Mobarry C, Merkulov GV, Charlab R, Dew I, Deng Z, Istrail S, Li P, Sutton G, Gene and alternative splicing annotation with AIR. Genome Res. 2005 Jan;15(1):54-66.