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XSB2953 : coatomer protein complex, subunit beta 1 [Mus musculus]

[ CaMP Format ]

This entry is computationally expanded from SB0044

* Basic Information

OrganismMus musculus (house mouse)
Protein NamesCoatomer subunit beta; Beta-coat protein; Beta-COP; coatomer protein complex; subunit beta 1
Gene NamesCopb1; Copb; coatomer protein complex, subunit beta 1
Gene Locus7 53.3 cM; chromosome 7
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
NP_203534 NM_033370 70349 COPB_MOUSE N/A N/A N/A mmu:70349

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 953 aa

Average Mass: 107.066 kDa

Monoisotopic Mass: 106.998 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Adaptin_N 1. 18550532.26.3e-157
--- cleavage 528 (inside Adaptin_N 18..550) ---
Coatamer_beta_C 1. 665947562.93.6e-166

3. Sequence Information

Fasta Sequence: XSB2953.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)


Ser528 Ser

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'

Sequence conservation (by blast)

* References

[PubMed ID: 17698811] Bi J, Tsai NP, Lu HY, Loh HH, Wei LN, Copb1-facilitated axonal transport and translation of kappa opioid-receptor mRNA. Proc Natl Acad Sci U S A. 2007 Aug 21;104(34):13810-5. Epub 2007 Aug 13.

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