logo CaMPDB: Calpain for Modulatory Proteolysis Database

XSB2992 : PREDICTED: similar to Vimentin [Equus caballus]

[ CaMP Format ]

This entry is computationally expanded from SB0037

* Basic Information

OrganismEquus caballus (horse)
Protein Namessimilar to Vimentin
Gene NamesLOC100056088; The sequence of the transcript was modified to remove frameshifts and prevent a premature stop codon represented in this assembly; Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 16 ESTs, 3 Proteins
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
XP_001916320 XM_001916285 100056088 N/A N/A N/A N/A N/A

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 468 aa

Average Mass: 0.000 kDa

Monoisotopic Mass: 0.000 kDa

2. Domain Information

Annotated Domains: Not Available.

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Filament_head 1. 69971.82.6e-18
Filament 1. 103412515.85.6e-152
--- cleavage 266 (inside Filament 103..412) ---

3. Sequence Information

Fasta Sequence: XSB2992.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)


Asp266 Leu

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'

Sequence conservation (by blast)

* References