logo CaMPDB: Calpain for Modulatory Proteolysis Database

XSB2994 : PREDICTED: similar to Vimentin, partial [Ornithorhynchus anatinus]

[ CaMP Format ]

This entry is computationally expanded from SB0037

* Basic Information

OrganismOrnithorhynchus anatinus (platypus)
Protein Namessimilar to Vimentin
Gene NamesLOC100092512; Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 68 ESTs, 38 Proteins
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
XP_001521102 XM_001521052 100092512 N/A N/A N/A N/A N/A

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 278 aa

Average Mass: 32.416 kDa

Monoisotopic Mass: 32.396 kDa

2. Domain Information

Annotated Domains: Not Available.

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Filament 1. 1222311.81.4e-90
--- cleavage 76 (inside Filament 1..222) ---

3. Sequence Information

Fasta Sequence: XSB2994.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)


Asp76 Leu

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'

Sequence conservation (by blast)

* References